Protein ZmABI28
ZmABI28 is a protein in the ABI3-VP1 family.
Information
TF Name: ZmABI28
Species: Maize
TF Family: ABI3-VP1
Gene Name(Synonym): ABI28
Uniprot ID: A0A1D6PDQ1

Protein ZmABI28

ZmABI28 is a protein in the ABI3-VP1 family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Overview of domains present in v5 transcripts
PF02362
Zm00001eb088080_T003
Zm00001eb088080_T001
Zm00001eb088080_T002

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d004358DAPseq no logo sequence fimo position
Zm00001d004358DAPseq no logo sequence fimo position
Zm00001d004358ChIPseq no logo sequence fimo position
Zm00001d004358PChIPseq no logo sequence fimo position

Interactions where ZmABI28 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmABI28 is the target  
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There are 37 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb088080_T003 from maize genome v5

Amino Acid Sequence
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MPLPSDSGSGARAMSKQFKVLLPTSFHKLRISDELAGCFDAGEGEGAPEPTALVVSPFGKVWRVEVVRDGHGASLGRGWA
EFLAAHGVGIGWFVVLRYEGGGALTVKVFDTSLCIKEFGAPAAVMPSKSCKSIFCKPQFIRIFHSNLSEKMMLPARFVKD
YVSEECLNSRIAIIFSPIAKFWRVELKNDQSGIFFTGGWSQFLDFHGIKNGEVLLLKYEGNMVFKFKAFGLSGCQKDFKN
QNAGIQLNTKKQQETPPIRKRKSNDEKSSSEENKRLKTPVTSPSPSDPSLEKPYQIGTSSWIKKRINTYALEQFLALSVK
FCNSIGFRMACTITLKTATNSTRSWQVRGTAYKWHRYIIGVGWKSFCQDNRLKAGDLCTFNIIETTLWHVTITRSALAAD
TFNKQKKPPCSSSRDKKGSSSREGAKRPKPSMAHFSKVQVPPSYARRCAYDVGPPPWIRKQMNASTIRNRLVRMVILAFD
SRKLVIGVKIIQNTYEPVWHRPSAIRLSCGDAARSCSRPRSTAIILGGLVVSRRRRVVTLLGPVGKNSARRTELRLVMSA
PSMSSKPSCGMSSSHAVAKLWLLQPA

MPLPSDSGSGARAMSKQFKVLLPTSFHKLRISDELAGCFDAGEGEGAPEPTALVVSPFGKVWRVEVVRDGHGASLGRGWA
EFLAAHGVGIGWFVVLRYEGGGALTVKVFDTSLCIKEFGAPAAVMPSKSCKSIFCKPQFIRIFHSNLSEKMMLPARFVKD
YVSEECLNSRIAIIFSPIAKFWRVELKNDQSGIFFTGGWSQFLDFHGIKNGEVLLLKYEGNMVFKFKAFGLSGCQKDFKN
QNAGIQLNTKKQQETPPIRKRKSNDEKSSSEENKRLKTPVTSPSPSDPSLEKPYQIGTSSWIKKRINTYALEQFLALSVK
FCNSIGFRMACTITLKTATNSTRSWQVRGTAYKWHRYIIGVGWKSFCQDNRLKAGDLCTFNIIETTLWHVTITRSALAAD
TFNKQKKPPCSSSRDKKGSSSREGAKRPKPSMAHFSKVQVPPSYARRCAYDVGPPPWIRKQMNASTIRNRLVRMVILAFD
SRKLVIGVKIIQNTYEPVWHRPSAIRLSCGDAARSCSRPRSTAIILGGLVVSRRRRVVTLLGPVGKNSARRTELRLVMSA
PSMSSKPSCGMSSSHAVAKLWLLQPA

MPLPSDSGSGARAMSKQFKVLLPTSFHKLRISDELAGCFDAGEGEGAPEPTALVVSPFGKVWRVEVVRDGHGASLGRGWA
EFLAAHGVGIGWFVVLRYEGGGALTVKVFDTSLCIKEFGAPAAVMPSKSCKSIFCKPQFIRIFHSNLSEKMMLPARFVKD
YVSEECLNSRIAIIFSPIAKFWRVELKNDQSGIFFTGGWSQFLDFHGIKNGEVLLLKYEGNMVFKFKAFGLSGCQKDFKN
QNAGIQLNTKKQQETPPIRKRKSNDEKSSSEENKRLKTPVTSPSPSDPSLEKPYQIGTSSWIKKRINTYALEQFLALSVK
FCNSIGFRMACTITLKTATNSTRSWQVRGTAYKWHRYIIGVGWKSFCQDNRLKAGDLCTFNIIETTLWHVTITRSALAAD
TFNKQKKPPCSSSRDKKGSSSREGAKRPKPSMAHFSKVQVPPSYARRCAYDVGPPPWIRKQMNASTIRNRLVRMVILAFD
SRKLVIGVKIIQNTYEPVWHRPSAIRLSCGDAARSCSRPRSTAIILGGLVVSRRRRVVTLLGPVGKNSARRTELRLVMSA
PSMSSKPSCGMSSSHAVAKLWLLQPA

MPLPSDSGSGARAMSKQFKVLLPTSFHKLRISDELAGCFDAGEGEGAPEPTALVVSPFGKVWRVEVVRDGHGASLGRGWA
EFLAAHGVGIGWFVVLRYEGGGALTVKVFDTSLCIKEFGAPAAVMPSKSCKSIFCKPQFIRIFHSNLSEKMMLPARFVKD
YVSEECLNSRIAIIFSPIAKFWRVELKNDQSGIFFTGGWSQFLDFHGIKNGEVLLLKYEGNMVFKFKAFGLSGCQKDFKN
QNAGIQLNTKKQQETPPIRKRKSNDEKSSSEENKRLKTPVTSPSPSDPSLEKPYQIGTSSWIKKRINTYALEQFLALSVK
FCNSIGFRMACTITLKTATNSTRSWQVRGTAYKWHRYIIGVGWKSFCQDNRLKAGDLCTFNIIETTLWHVTITRSALAAD
TFNKQKKPPCSSSRDKKGSSSREGAKRPKPSMAHFSKVQVPPSYARRCAYDVGPPPWIRKQMNASTIRNRLVRMVILAFD
SRKLVIGVKIIQNTYEPVWHRPSAIRLSCGDAARSCSRPRSTAIILGGLVVSRRRRVVTLLGPVGKNSARRTELRLVMSA
PSMSSKPSCGMSSSHAVAKLWLLQPA

MPLPSDSGSGARAMSKQFKVLLPTSFHKLRISDELAGCFDAGEGEGAPEPTALVVSPFGKVWRVEVVRDGHGASLGRGWA
EFLAAHGVGIGWFVVLRYEGGGALTVKVFDTSLCIKEFGAPAAVMPSKSCKSIFCKPQFIRIFHSNLSEKMMLPARFVKD
YVSEECLNSRIAIIFSPIAKFWRVELKNDQSGIFFTGGWSQFLDFHGIKNGEVLLLKYEGNMVFKFKAFGLSGCQKDFKN
QNAGIQLNTKKQQETPPIRKRKSNDEKSSSEENKRLKTPVTSPSPSDPSLEKPYQIGTSSWIKKRINTYALEQFLALSVK
FCNSIGFRMACTITLKTATNSTRSWQVRGTAYKWHRYIIGVGWKSFCQDNRLKAGDLCTFNIIETTLWHVTITRSALAAD
TFNKQKKPPCSSSRDKKGSSSREGAKRPKPSMAHFSKVQVPPSYARRCAYDVGPPPWIRKQMNASTIRNRLVRMVILAFD
SRKLVIGVKIIQNTYEPVWHRPSAIRLSCGDAARSCSRPRSTAIILGGLVVSRRRRVVTLLGPVGKNSARRTELRLVMSA
PSMSSKPSCGMSSSHAVAKLWLLQPA

MPLPSDSGSGARAMSKQFKVLLPTSFHKLRISDELAGCFDAGEGEGAPEPTALVVSPFGKVWRVEVVRDGHGASLGRGWA
EFLAAHGVGIGWFVVLRYEGGGALTVKVFDTSLCIKEFGAPAAVMPSKSCKSIFCKPQFIRIFHSNLSEKMMLPARFVKD
YVSEECLNSRIAIIFSPIAKFWRVELKNDQSGIFFTGGWSQFLDFHGIKNGEVLLLKYEGNMVFKFKAFGLSGCQKDFKN
QNAGIQLNTKKQQETPPIRKRKSNDEKSSSEENKRLKTPVTSPSPSDPSLEKPYQIGTSSWIKKRINTYALEQFLALSVK
FCNSIGFRMACTITLKTATNSTRSWQVRGTAYKWHRYIIGVGWKSFCQDNRLKAGDLCTFNIIETTLWHVTITRSALAAD
TFNKQKKPPCSSSRDKKGSSSREGAKRPKPSMAHFSKVQVPPSYARRCAYDVGPPPWIRKQMNASTIRNRLVRMVILAFD
SRKLVIGVKIIQNTYEPVWHRPSAIRLSCGDAARSCSRPRSTAIILGGLVVSRRRRVVTLLGPVGKNSARRTELRLVMSA
PSMSSKPSCGMSSSHAVAKLWLLQPA

MPLPSDSGSGARAMSKQFKVLLPTSFHKLRISDELAGCFDAGEGEGAPEPTALVVSPFGKVWRVEVVRDGHGASLGRGWA
EFLAAHGVGIGWFVVLRYEGGGALTVKVFDTSLCIKEFGAPAAVMPSKSCKSIFCKPQFIRIFHSNLSEKMMLPARFVKD
YVSEECLNSRIAIIFSPIAKFWRVELKNDQSGIFFTGGWSQFLDFHGIKNGEVLLLKYEGNMVFKFKAFGLSGCQKDFKN
QNAGIQLNTKKQQETPPIRKRKSNDEKSSSEENKRLKTPVTSPSPSDPSLEKPYQIGTSSWIKKRINTYALEQFLALSVK
FCNSIGFRMACTITLKTATNSTRSWQVRGTAYKWHRYIIGVGWKSFCQDNRLKAGDLCTFNIIETTLWHVTITRSALAAD
TFNKQKKPPCSSSRDKKGSSSREGAKRPKPSMAHFSKVQVPPSYARRCAYDVGPPPWIRKQMNASTIRNRLVRMVILAFD
SRKLVIGVKIIQNTYEPVWHRPSAIRLSCGDAARSCSRPRSTAIILGGLVVSRRRRVVTLLGPVGKNSARRTELRLVMSA
PSMSSKPSCGMSSSHAVAKLWLLQPA

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF02362
PF02362
PF02362
Hover here to show all domains

Nucleotide Sequence
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ATTTACTCATGTCATTCAAGGCAAC...

GRMZM2G109879_T01 from maize genome v3


Related TFome: pUT5890

Amino Acid Sequence
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MPLPSDSGSGARAMSKQFKVLLPTSFHKLRISDELAGCFDAGEGEGAPEPTALVVSPFGKVWRVEVVRDGHGASLGRGWA
EFLAAHGVGIGWFVVLRYEGGGALTVKVFDTSLCIKEFGAPAAVMPSKSCKSIFCKPQFIRIFHSNLSEKMMLPARFVKD
YVSEECLNSRIAIIFSPIAKFWRVELKNDQSGIFFTGGWSQFLDFHGIKNGEVLLLKYEGNMVFKFKAFGLSGCQKDFKN
QNAGIQLNTKKQQETPPIRKRKSNDEKSSSEENKRLKTPVTSPSPSDPSLEKPYQIGTSSWIKKRINTYALEQFLALSVK
FCNSIGFRMACTITLKTATNSTRSWQVRGTAYKWHRYIIGVGWKSFCQDNRLKAGDLCTFNIIETTLWHVTITRSALAAD
TFNKQKKPPCSSSRDKKGSSSREGAKRPKPSMAHFSKVQVPPSYARRCAYDVGPPPWIRKQMNASTIRNRLCLAPAFCNQ
IELRRRCEIVLKTSINSNHSWRVGGLSQKKGSYIIGPGWKKFCTENRVKVGDVCTFNVIETQLWHVVITRRC

Nucleotide Sequence
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CTGACCCCTCTATTTACTCATGTCA...

GRMZM2G109879_T02 from maize genome v3

Amino Acid Sequence
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MPLPSDSGSGARAMSKQFKVLLPTSFHKLRISDELAGCFDAGEGEGAPEPTALVVSPFGKVWRVEVVRDGHGASLGRGWA
EFLAAHGVGIGWFVVLRYEGGGALTVKVFDTSLCIKEFGAPAAVMPSKSCKSIFCKPQFIRIFHSNLSEKMMLPARFVKD
YVSEECLNSRIAIIFSPIAKFWRVELKNDQSGIFFTGGWSQFLDFHGIKNGEVLLLKYEGNMVFKFKAFGLSGCQKDFKN
QNAGIQLNTKKQQETPPIRKRKSNDEKSSSEENKRLKTPVTSPSPSDPSLEKPYQIGTSSWIKKRINTYALEQFLALSVK
FCNSIGFRMACTITLKTATNSTRSWQVRGTAYKWHRYIIGVGWKSFCQDNRLKAGDLCTFNIIETTLWHVTITRSALAAD
TFNKQKKPPCSSSRDKKGSSSREGAKRPKPSMAHFSKVQVPPSYARRCAYDVGPPPWIRKQMNASTIRNRLVRMVILAFD
SRKLVIGVKIIQNTYEPVWHRPSAIRLSCGDAARSCSRPRSTAIILGGLVVSRRRRVVTLLGPVGKNSARRTELRLVMSA
PSMSSKPSCGMSSSHAVAKLWLLQPA

Nucleotide Sequence
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CTGACCCCTCTATTTACTCATGTCA...

Zm00001d004358_T001 from maize genome v4

Amino Acid Sequence
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MPLPSDSGSGARAMSKQFKVLLPTSFHKLVSTAFLDRRSISVADVSLSSRNPLIPQRISDELAGCFDAGEGEGAPEPTAL
VVSPFGKVWRVEVVRDGHGASLGRGWAEFLAAHGVGIGWFVVLRYEGGGALTVKVFDTSLCIKEFGAPAAVMPSKSCKSI
FCKPQFIRIFHSNLSEKMMLPARFVKDYVSEECLNSRIAIIFSPIAKFWRVELKNDQSGIFFTGGWSQFLDFHGIKNGEV
LLLKYEGNMVFKFKAFGLSGCQKDFKNQNAGIQLNTKKQQETPPIRKRKSNDEKSSSEENKRLKTPVTSPSPSDPSLEKP
YQIGTSSWIKKRINTYALEQFLALSVKFCNSIGFRMACTITLKTATNSTRSWQVRGTAYKWHRYIIGVGWKSFCQDNRLK
AGDLCTFNIIETTLWHVTITRSALAADTFNKQKKPPCSSSRDKKGSSSREGAKRPKPSMAHFSKVQCLAPAFCNQIELRR
RCEIVLKTSINSNHSWRVGGLSQKKGSYIIGPGWKKFCTENRVKVGDVCTFNVIETQLWHVVITRRC

Nucleotide Sequence
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ATGCCATTGCCCAGCGACTCTGGTT...

Zm00001d004358_T002 from maize genome v4

Amino Acid Sequence
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MPLPSDSGSGARAMSKQFKVLLPTSFHKLVSTAFLDRRSISVADVSLSSRNPLIPQRISDELAGCFDAGEGEGAPEPTAL
VVSPFGKVWRVEVVRDGHGASLGRGWAEFLAAHGVGIGWFVVLRYEGGGALTVKVFDTSLCIKEFGAPAAVMPSKSCKSI
FCKPQFIRIFHSNLSEKMMLPARFVKDYVSEECLNSRIAIIFSPIAKFWRVELKNDQSGIFFTGGWSQFLDFHGIKNGEV
LLLKYEGNMVFKFKAFGLSGCQKDFKNQNAGIQLNTKKQQETPPIRKRKSNDEKSSSEENKRLKTPVTSPSPSDPSLEKP
YQIGTSSWIKKRINTYALEQFLALSVKFCNSIGFRMACTITLKTATNSTRSWQVRGTAYKWHRYIIGVGWKSFCQDNRLK
AGDLCTFNIIETTLWHVTITRSALAADTFNKQKKPPCSSSRDKKGSSSREGAKRPKPSMAHFSKVQVPPSYARRCAYDVG
PPPWIRKQMNASTIRNRLVRMVILAFDSRKLVIGCLAPAFCNQIELRRRCEIVLKTSINSNHSWRVGGLSQKKGSYIIGP
GWKKFCTENRVKVGDVCTFNVIETQLWHVVITRRC

Nucleotide Sequence
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ATGCCATTGCCCAGCGACTCTGGTT...

Zm00001d004358_T003 from maize genome v4

Amino Acid Sequence
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MPLPSDSGSGARAMSKQFKVLLPTSFHKLRISDELAGCFDAGEGEGAPEPTALVVSPFGKVWRVEVVRDGHGASLGRGWA
EFLAAHGVGIGWFVVLRYEGGGALTVKVFDTSLCIKEFGAPAAVMPSKSCKSIFCKPQFIRIFHSNLSEKMMLPARFVKD
YVSEECLNSRIAIIFSPIAKFWRVELKNDQSGIFFTGGWSQFLDFHGIKNGEVLLLKYEGNMVFKFKAFGLSGCQKDFKN
QNAGIQLNTKKQQETPPIRKRKSNDEKSSSEENKRLKTPVTSPSPSDPSLEKPYQIGTSSWIKKRINTYALEQFLALSVK
FCNSIGFRMACTITLKTATNSTRSWQVRGTAYKWHRYIIGVGWKSFCQDNRLKAGDLCTFNIIETTLWHVTITRSALAAD
TFNKQKKPPCSSSRDKKGSSSREGAKRPKPSMAHFSKVQVPPSYARRCAYDVGPPPWIRKQMNASTIRNRLCLAPAFCNQ
IELRRRCEIVLKTSINSNHSWRVGGLSQKKGSYIIGPGWKKFCTENRVKVGDVCTFNVIETQLWHVVITRRC

Nucleotide Sequence
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GTGCAGCGTTCAGCTTCAGCAGCGC...

Zm00001d004358_T004 from maize genome v4

Amino Acid Sequence
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MPLPSDSGSGARAMSKQFKVLLPTSFHKLRISDELAGCFDAGEGEGAPEPTALVVSPFGKVWRVEVVRDGHGASLGRGWA
EFLAAHGVGIGWFVVLRYEGGGALTVKVFDTSLCIKEFGAPAAVMPSKSCKSIFCKPQFIRIFHSNLSEKMMLPARFVKD
YVSEECLNSRIAIIFSPIAKFWRVELKNDQSGIFFTGGWSQFLDFHGIKNGEVLLLKYEGNMVFKFKAFGLSGCQKDFKN
QNAGIQLNTKKQQETPPIRKRKSNDEKSSSEENKRLKTPVTSPSPSDPSLEKPYQIGTSSWIKKRINTYALEQFLCLAPA
FCNQIELRRRCEIVLKTSINSNHSWRVGGLSQKKGSYIIGPGWKKFCTENRVKVGDVCTFNVIETQLWHVVITRRC

Nucleotide Sequence
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GACCCCTCTATTTACTCATGTCATT...

Zm00001eb088080_T001 from maize genome v5

Amino Acid Sequence
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MPLPSDSGSGARAMSKQFKRISDELAGCFDAGEGEGAPEPTALVVSPFGKVWRVEVVRDGHGASLGRGWAEFLAAHGVGI
GWFVVLRYEGGGALTVKVFDTSLCIKEFGAPAAVMPSKSCKSIFCKPQFIRIFHSNLSEKMMLPARFVKDYVSEECLNSR
IAIIFSPIAKFWRVELKNDQSGIFFTGGWSQFLDFHGIKNGEVLLLKYEGNMVFKFKAFGLSGCQKDFKNQNAGIQLNTK
KQQETPPIRKRKSNDEKSSSEENKRLKTPVTSPSPSDPSLEKPYQIGTSSWIKKRINTYALEQFLALSVKFCNSIGFRMA
CTITLKTATNSTRSWQVRGTAYKWHRYIIGVGWKSFCQDNRLKAGDLCTFNIIETTLWHVTITRSALAADTFNKQKKPPC
SSSRDKKGSSSREGAKRPKPSMAHFSKVQVPPSYARRCAYDVGPPPWIRKQMNASTIRNRLCLAPAFCNQIELRRRCEIV
LKTSINSNHSWRVGGLSQKKGSYIIGPGWKKFCTENRVKVGDVCTFNVIETQLWHVVITRRC

Nucleotide Sequence
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ATTTACTCATGTCATTCAAGGCAAC...

Zm00001eb088080_T002 from maize genome v5

Amino Acid Sequence
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MPLPSDSGSGARAMSKQFKVLLPTSFHKLRISDELAGCFDAGEGEGAPEPTALVVSPFGKVWRVEVVRDGHGASLGRGWA
EFLAAHGVGIGWFVVLRYEGGGALTVKVFDTSLCIKEFGAPAAVMPSKSCKSIFCKPQFIRIFHSNLSEKMMLPARFVKD
YVSEECLNSRIAIIFSPIAKFWRVELKNDQSGIFFTGGWSQFLDFHGIKNGEVLLLKYEGNMVFKFKAFGLSGCQKDFKN
QNAGIQLNTKKQQETPPIRKRKSNDEKSSSEENKRLKTPVTSPSPSDPSLEKPYQIGTSSWIKKRINTYALEQFLALSVK
FCNSIGFRMACTITLKTATNSTRSWQVRGTAYKWHRYIIGVGWKSFCQDNRLKAGDLCTFNIIETTLWHVTITRSALAAD
TFNKQKKPPCSSSRDKKGSSSREGAKRPKPSMAHFSKVQVPPSYARRCAYDVGPPPWIRKQMNASTIRNRLCLAPAFCNQ
IELRRRCEIVLKTSINSNHSWRVGGLSQKKGSYIIGPGWKKFCTENRVKVGDVCTFNVIETQLWHVVITRRC

Nucleotide Sequence
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ATTTACTCATGTCATTCAAGGCAAC...


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